I just noticed that it only minimizes and continues to minimize War2 if I try launch it via a shortcut on the desktop. When I launch War2PLoader or War2noCDLoader from the War2Combat folder, it doesn't minimize but it still seems to activate the start menu and it overlaps the game screen. I'm able to get rid of the overlapping start menu by simply pressing the Windows key on my keyboard. However, when I alt+tab to the desktop, the start menu still pops up and I am unable to maximize the War2 screen from there. While the war2 program is running, the start menu continues to pop up even when I try to collapse it.
Also, I've tried to get a recording this issue on my desktop and it cuts off the recording when I launch war2 and starts a new vid.